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Flexible scientific workflow modeling using frames, templates, and dynamic embedding

  • Anne H.H. Ngub(Author)
    ,
  • Shawn Bowersa, d(Author)
    ,
  • Nicholas Haaschb(Author)
    ,
  • Timothy McPhillipsd(Author)
    ,
  • Terence Critchlowc(Author)
  • aGenome Center
    ,
  • bTexas State University
    ,
  • cPacific Northwest Laboratory
    ,
  • dUniversity of California, Davis
Research Output: Chapter in Book/Report/Conference proceeding Conference contribution

Abstract

While most scientific workflows systems are based on dataflow, some amount of control-flow modeling is often necessary for engineering fault-tolerant, robust, and adaptive workflows. However, control-flow modeling within dataflow often results in workflow specifications that are hard to comprehend, reuse, and maintain. We describe new modeling constructs to address these issues that provide a structured approach for modeling control-flow within scientific workflows, and discuss their implementation within the Kepler scientific workflow system.